Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IghmP01872 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IghmP01872 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IghmP01872 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IghmP01872 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.23■□□□□ 0.67
IghmP01872 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.23■□□□□ 0.67
IghmP01872 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IghmP01872 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IghmP01872 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.23■□□□□ 0.67
IghmP01872 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IghmP01872 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IghmP01872 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.22■□□□□ 0.67
IghmP01872 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IghmP01872 Gm10399-202ENSMUST00000202768 748 ntBASIC19.22■□□□□ 0.67
IghmP01872 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IghmP01872 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IghmP01872 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IghmP01872 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IghmP01872 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IghmP01872 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IghmP01872 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.21■□□□□ 0.67
IghmP01872 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IghmP01872 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IghmP01872 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IghmP01872 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IghmP01872 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IghmP01872 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.21■□□□□ 0.67
IghmP01872 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IghmP01872 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IghmP01872 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IghmP01872 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IghmP01872 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IghmP01872 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
IghmP01872 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IghmP01872 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IghmP01872 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.19■□□□□ 0.66
IghmP01872 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
IghmP01872 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IghmP01872 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IghmP01872 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IghmP01872 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
IghmP01872 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IghmP01872 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.18■□□□□ 0.66
IghmP01872 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IghmP01872 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IghmP01872 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IghmP01872 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IghmP01872 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.17■□□□□ 0.66
IghmP01872 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IghmP01872 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IghmP01872 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IghmP01872 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
IghmP01872 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IghmP01872 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
IghmP01872 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
IghmP01872 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IghmP01872 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IghmP01872 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IghmP01872 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IghmP01872 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IghmP01872 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.16■□□□□ 0.66
IghmP01872 Gm10232-201ENSMUST00000089221 720 ntBASIC19.16■□□□□ 0.66
IghmP01872 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IghmP01872 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.16■□□□□ 0.66
IghmP01872 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IghmP01872 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IghmP01872 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IghmP01872 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IghmP01872 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IghmP01872 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IghmP01872 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IghmP01872 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IghmP01872 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IghmP01872 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
IghmP01872 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
IghmP01872 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
IghmP01872 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
IghmP01872 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IghmP01872 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.15■□□□□ 0.66
IghmP01872 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IghmP01872 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IghmP01872 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IghmP01872 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IghmP01872 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.14■□□□□ 0.65
IghmP01872 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.14■□□□□ 0.65
IghmP01872 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IghmP01872 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IghmP01872 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IghmP01872 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
IghmP01872 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IghmP01872 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IghmP01872 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms