Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLPTM1O96005 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLPTM1O96005 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.38■■□□□ 1.01
CLPTM1O96005 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.38■■□□□ 1.01
CLPTM1O96005 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLPTM1O96005 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLPTM1O96005 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLPTM1O96005 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLPTM1O96005 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLPTM1O96005 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.38■■□□□ 1.01
CLPTM1O96005 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLPTM1O96005 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLPTM1O96005 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLPTM1O96005 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.37■■□□□ 1.01
CLPTM1O96005 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLPTM1O96005 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CLPTM1O96005 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.37■■□□□ 1.01
CLPTM1O96005 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.37■■□□□ 1.01
CLPTM1O96005 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CLPTM1O96005 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPTM1O96005 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CLPTM1O96005 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
CLPTM1O96005 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPTM1O96005 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPTM1O96005 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.36■■□□□ 1.01
CLPTM1O96005 AC060814.1-201ENST00000554326 538 ntBASIC21.36■■□□□ 1.01
CLPTM1O96005 AL121603.2-201ENST00000557373 2117 ntBASIC21.36■■□□□ 1.01
CLPTM1O96005 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLPTM1O96005 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.36■■□□□ 1.01
CLPTM1O96005 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLPTM1O96005 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
CLPTM1O96005 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPTM1O96005 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPTM1O96005 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.35■■□□□ 1.01
CLPTM1O96005 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.35■■□□□ 1.01
CLPTM1O96005 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CLPTM1O96005 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPTM1O96005 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPTM1O96005 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPTM1O96005 AL359258.2-201ENST00000564063 1566 ntBASIC21.35■■□□□ 1.01
CLPTM1O96005 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLPTM1O96005 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CLPTM1O96005 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CLPTM1O96005 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.34■■□□□ 1.01
CLPTM1O96005 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CLPTM1O96005 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CLPTM1O96005 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CLPTM1O96005 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.34■■□□□ 1.01
CLPTM1O96005 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLPTM1O96005 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CLPTM1O96005 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CLPTM1O96005 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPTM1O96005 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.33■■□□□ 1.01
CLPTM1O96005 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLPTM1O96005 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.32■■□□□ 1
CLPTM1O96005 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.32■■□□□ 1
CLPTM1O96005 AC126177.7-201ENST00000547904 679 ntBASIC21.32■■□□□ 1
CLPTM1O96005 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLPTM1O96005 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPTM1O96005 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPTM1O96005 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLPTM1O96005 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPTM1O96005 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLPTM1O96005 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.32■■□□□ 1
CLPTM1O96005 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CLPTM1O96005 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPTM1O96005 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CLPTM1O96005 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPTM1O96005 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLPTM1O96005 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLPTM1O96005 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLPTM1O96005 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPTM1O96005 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.31■■□□□ 1
CLPTM1O96005 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPTM1O96005 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLPTM1O96005 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CLPTM1O96005 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.31■■□□□ 1
CLPTM1O96005 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CLPTM1O96005 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CLPTM1O96005 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLPTM1O96005 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CLPTM1O96005 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.3■■□□□ 1
CLPTM1O96005 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.3■■□□□ 1
CLPTM1O96005 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.3■■□□□ 1
CLPTM1O96005 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.3■■□□□ 1
CLPTM1O96005 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.3■■□□□ 1
CLPTM1O96005 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLPTM1O96005 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLPTM1O96005 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLPTM1O96005 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CLPTM1O96005 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms