Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ShdO88834 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShdO88834 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ShdO88834 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ShdO88834 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ShdO88834 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ShdO88834 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ShdO88834 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ShdO88834 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ShdO88834 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ShdO88834 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Gm7417-201ENSMUST00000192950 473 ntBASIC20.88■□□□□ 0.93
ShdO88834 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ShdO88834 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ShdO88834 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ShdO88834 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ShdO88834 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShdO88834 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShdO88834 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ShdO88834 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShdO88834 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.86■□□□□ 0.93
ShdO88834 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ShdO88834 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.86■□□□□ 0.93
ShdO88834 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShdO88834 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ShdO88834 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ShdO88834 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShdO88834 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ShdO88834 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ShdO88834 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShdO88834 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShdO88834 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ShdO88834 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ShdO88834 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShdO88834 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ShdO88834 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.85■□□□□ 0.93
ShdO88834 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShdO88834 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ShdO88834 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShdO88834 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ShdO88834 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.84■□□□□ 0.93
ShdO88834 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ShdO88834 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ShdO88834 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ShdO88834 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ShdO88834 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
ShdO88834 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ShdO88834 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ShdO88834 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ShdO88834 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ShdO88834 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ShdO88834 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ShdO88834 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ShdO88834 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.83■□□□□ 0.93
ShdO88834 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ShdO88834 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ShdO88834 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShdO88834 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShdO88834 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShdO88834 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShdO88834 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShdO88834 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShdO88834 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShdO88834 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ShdO88834 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ShdO88834 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShdO88834 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ShdO88834 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ShdO88834 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ShdO88834 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ShdO88834 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShdO88834 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShdO88834 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShdO88834 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ShdO88834 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ShdO88834 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShdO88834 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ShdO88834 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
ShdO88834 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ShdO88834 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShdO88834 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ShdO88834 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ShdO88834 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ShdO88834 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms