Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a2O88627 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a2O88627 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.07■□□□□ 0.48
Slc28a2O88627 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc28a2O88627 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Slc28a2O88627 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a2O88627 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a2O88627 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a2O88627 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc28a2O88627 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a2O88627 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a2O88627 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc28a2O88627 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Slc28a2O88627 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a2O88627 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a2O88627 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.06■□□□□ 0.48
Slc28a2O88627 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a2O88627 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slc28a2O88627 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc28a2O88627 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc28a2O88627 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.05■□□□□ 0.48
Slc28a2O88627 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc28a2O88627 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a2O88627 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.04■□□□□ 0.48
Slc28a2O88627 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a2O88627 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.04■□□□□ 0.48
Slc28a2O88627 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.04■□□□□ 0.48
Slc28a2O88627 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.04■□□□□ 0.48
Slc28a2O88627 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a2O88627 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a2O88627 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Slc28a2O88627 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc28a2O88627 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a2O88627 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a2O88627 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slc28a2O88627 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a2O88627 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Slc28a2O88627 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a2O88627 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc28a2O88627 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc28a2O88627 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Slc28a2O88627 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc28a2O88627 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.02■□□□□ 0.48
Slc28a2O88627 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc28a2O88627 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc28a2O88627 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Slc28a2O88627 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Slc28a2O88627 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Slc28a2O88627 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc28a2O88627 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc28a2O88627 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc28a2O88627 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Slc28a2O88627 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc28a2O88627 Gm43566-201ENSMUST00000196851 808 ntBASIC18.01■□□□□ 0.47
Slc28a2O88627 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Slc28a2O88627 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc28a2O88627 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc28a2O88627 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc28a2O88627 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18■□□□□ 0.47
Slc28a2O88627 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc28a2O88627 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc28a2O88627 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc28a2O88627 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc28a2O88627 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc28a2O88627 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Slc28a2O88627 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18■□□□□ 0.47
Slc28a2O88627 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc28a2O88627 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.99■□□□□ 0.47
Slc28a2O88627 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Slc28a2O88627 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.99■□□□□ 0.47
Slc28a2O88627 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc28a2O88627 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc28a2O88627 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc28a2O88627 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc28a2O88627 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.98■□□□□ 0.47
Slc28a2O88627 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc28a2O88627 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Slc28a2O88627 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Slc28a2O88627 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Slc28a2O88627 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.98■□□□□ 0.47
Slc28a2O88627 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc28a2O88627 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms