Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cxcl13O55038 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.36■□□□□ 0.37
Cxcl13O55038 Gm6139-201ENSMUST00000079261 882 ntBASIC17.36■□□□□ 0.37
Cxcl13O55038 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcl13O55038 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl13O55038 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl13O55038 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl13O55038 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.35■□□□□ 0.37
Cxcl13O55038 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.35■□□□□ 0.37
Cxcl13O55038 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl13O55038 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.35■□□□□ 0.37
Cxcl13O55038 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl13O55038 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl13O55038 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcl13O55038 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cxcl13O55038 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.34■□□□□ 0.37
Cxcl13O55038 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.34■□□□□ 0.37
Cxcl13O55038 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl13O55038 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Cxcl13O55038 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cxcl13O55038 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.34■□□□□ 0.37
Cxcl13O55038 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl13O55038 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cxcl13O55038 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cxcl13O55038 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cxcl13O55038 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Cxcl13O55038 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Cxcl13O55038 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl13O55038 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Cxcl13O55038 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cxcl13O55038 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl13O55038 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl13O55038 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl13O55038 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl13O55038 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl13O55038 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl13O55038 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.32■□□□□ 0.36
Cxcl13O55038 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cxcl13O55038 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl13O55038 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cxcl13O55038 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.32■□□□□ 0.36
Cxcl13O55038 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl13O55038 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl13O55038 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl13O55038 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Cxcl13O55038 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl13O55038 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl13O55038 Gm8493-201ENSMUST00000196881 489 ntBASIC17.31■□□□□ 0.36
Cxcl13O55038 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl13O55038 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl13O55038 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
Cxcl13O55038 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl13O55038 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl13O55038 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl13O55038 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl13O55038 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.3■□□□□ 0.36
Cxcl13O55038 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl13O55038 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.29■□□□□ 0.36
Cxcl13O55038 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.29■□□□□ 0.36
Cxcl13O55038 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.29■□□□□ 0.36
Cxcl13O55038 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cxcl13O55038 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl13O55038 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cxcl13O55038 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl13O55038 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cxcl13O55038 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
Cxcl13O55038 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.28■□□□□ 0.36
Cxcl13O55038 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Cxcl13O55038 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl13O55038 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl13O55038 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl13O55038 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl13O55038 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl13O55038 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl13O55038 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cxcl13O55038 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl13O55038 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl13O55038 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl13O55038 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl13O55038 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl13O55038 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl13O55038 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl13O55038 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl13O55038 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.27■□□□□ 0.36
Cxcl13O55038 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cxcl13O55038 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.27■□□□□ 0.36
Cxcl13O55038 Gm43017-201ENSMUST00000198296 752 ntBASIC17.27■□□□□ 0.36
Cxcl13O55038 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cxcl13O55038 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cxcl13O55038 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl13O55038 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl13O55038 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms