Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk2O54785 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk2O54785 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk2O54785 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.77■□□□□ 0.92
Limk2O54785 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Limk2O54785 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Limk2O54785 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Limk2O54785 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Limk2O54785 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Limk2O54785 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.76■□□□□ 0.91
Limk2O54785 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Limk2O54785 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Limk2O54785 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk2O54785 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk2O54785 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk2O54785 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Limk2O54785 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Limk2O54785 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Limk2O54785 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk2O54785 Gm27454-201ENSMUST00000185090 204 ntBASIC20.74■□□□□ 0.91
Limk2O54785 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk2O54785 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk2O54785 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk2O54785 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Limk2O54785 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk2O54785 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.73■□□□□ 0.91
Limk2O54785 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Limk2O54785 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk2O54785 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk2O54785 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.73■□□□□ 0.91
Limk2O54785 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk2O54785 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk2O54785 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.73■□□□□ 0.91
Limk2O54785 Gm7143-201ENSMUST00000222811 859 ntBASIC20.73■□□□□ 0.91
Limk2O54785 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk2O54785 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Limk2O54785 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Limk2O54785 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk2O54785 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk2O54785 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk2O54785 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk2O54785 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk2O54785 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.72■□□□□ 0.91
Limk2O54785 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Limk2O54785 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.72■□□□□ 0.91
Limk2O54785 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Limk2O54785 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.72■□□□□ 0.91
Limk2O54785 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk2O54785 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Limk2O54785 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.71■□□□□ 0.91
Limk2O54785 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Limk2O54785 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.71■□□□□ 0.91
Limk2O54785 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.71■□□□□ 0.91
Limk2O54785 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Limk2O54785 Golgb1-201ENSMUST00000023534 498 ntBASIC20.71■□□□□ 0.91
Limk2O54785 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Limk2O54785 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.71■□□□□ 0.91
Limk2O54785 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Limk2O54785 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Limk2O54785 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.7■□□□□ 0.9
Limk2O54785 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
Limk2O54785 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Limk2O54785 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk2O54785 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk2O54785 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk2O54785 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Limk2O54785 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.69■□□□□ 0.9
Limk2O54785 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Limk2O54785 Gm45417-201ENSMUST00000209533 758 ntBASIC20.69■□□□□ 0.9
Limk2O54785 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Limk2O54785 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Limk2O54785 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Limk2O54785 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Limk2O54785 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.68■□□□□ 0.9
Limk2O54785 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Limk2O54785 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.68■□□□□ 0.9
Limk2O54785 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Limk2O54785 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.68■□□□□ 0.9
Limk2O54785 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Limk2O54785 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Limk2O54785 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Limk2O54785 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Limk2O54785 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Limk2O54785 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Limk2O54785 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Limk2O54785 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Limk2O54785 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Limk2O54785 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Limk2O54785 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Limk2O54785 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms