Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nr1i3O35627 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nr1i3O35627 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Nr1i3O35627 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nr1i3O35627 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nr1i3O35627 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nr1i3O35627 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Nr1i3O35627 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nr1i3O35627 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.04■■□□□ 1.12
Nr1i3O35627 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Nr1i3O35627 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nr1i3O35627 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nr1i3O35627 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.04■■□□□ 1.12
Nr1i3O35627 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nr1i3O35627 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nr1i3O35627 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nr1i3O35627 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nr1i3O35627 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nr1i3O35627 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nr1i3O35627 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nr1i3O35627 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nr1i3O35627 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nr1i3O35627 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.02■■□□□ 1.12
Nr1i3O35627 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nr1i3O35627 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nr1i3O35627 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.02■■□□□ 1.12
Nr1i3O35627 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nr1i3O35627 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nr1i3O35627 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nr1i3O35627 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nr1i3O35627 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.01■■□□□ 1.11
Nr1i3O35627 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nr1i3O35627 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nr1i3O35627 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nr1i3O35627 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22■■□□□ 1.11
Nr1i3O35627 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22■■□□□ 1.11
Nr1i3O35627 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22■■□□□ 1.11
Nr1i3O35627 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Nr1i3O35627 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22■■□□□ 1.11
Nr1i3O35627 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22■■□□□ 1.11
Nr1i3O35627 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22■■□□□ 1.11
Nr1i3O35627 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nr1i3O35627 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Nr1i3O35627 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Nr1i3O35627 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nr1i3O35627 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Nr1i3O35627 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.99■■□□□ 1.11
Nr1i3O35627 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Nr1i3O35627 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nr1i3O35627 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nr1i3O35627 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nr1i3O35627 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nr1i3O35627 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nr1i3O35627 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nr1i3O35627 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nr1i3O35627 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Nr1i3O35627 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nr1i3O35627 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Nr1i3O35627 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Nr1i3O35627 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nr1i3O35627 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Nr1i3O35627 Gm10232-201ENSMUST00000089221 720 ntBASIC21.97■■□□□ 1.11
Nr1i3O35627 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nr1i3O35627 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nr1i3O35627 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nr1i3O35627 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nr1i3O35627 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nr1i3O35627 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.96■■□□□ 1.11
Nr1i3O35627 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
Nr1i3O35627 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nr1i3O35627 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nr1i3O35627 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.96■■□□□ 1.11
Nr1i3O35627 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1i3O35627 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1i3O35627 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.95■■□□□ 1.1
Nr1i3O35627 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.95■■□□□ 1.1
Nr1i3O35627 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1i3O35627 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Nr1i3O35627 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1i3O35627 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1i3O35627 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1i3O35627 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1i3O35627 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1i3O35627 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1i3O35627 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.94■■□□□ 1.1
Nr1i3O35627 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.94■■□□□ 1.1
Nr1i3O35627 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1i3O35627 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.94■■□□□ 1.1
Nr1i3O35627 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1i3O35627 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Nr1i3O35627 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1i3O35627 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 266.8 ms