Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abca4O35600 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abca4O35600 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.63■□□□□ 0.73
Abca4O35600 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Abca4O35600 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Abca4O35600 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.62■□□□□ 0.73
Abca4O35600 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca4O35600 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Abca4O35600 Gm20049-201ENSMUST00000219950 730 ntBASIC19.62■□□□□ 0.73
Abca4O35600 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca4O35600 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca4O35600 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca4O35600 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca4O35600 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Abca4O35600 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca4O35600 Gm37856-201ENSMUST00000191634 999 ntBASIC19.62■□□□□ 0.73
Abca4O35600 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Abca4O35600 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abca4O35600 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abca4O35600 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.61■□□□□ 0.73
Abca4O35600 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Abca4O35600 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.61■□□□□ 0.73
Abca4O35600 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Abca4O35600 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Abca4O35600 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Abca4O35600 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Abca4O35600 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Abca4O35600 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Abca4O35600 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abca4O35600 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abca4O35600 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abca4O35600 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Abca4O35600 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Abca4O35600 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abca4O35600 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.59■□□□□ 0.73
Abca4O35600 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abca4O35600 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abca4O35600 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Abca4O35600 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Abca4O35600 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.59■□□□□ 0.73
Abca4O35600 Gm7514-201ENSMUST00000209475 934 ntBASIC19.59■□□□□ 0.73
Abca4O35600 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Abca4O35600 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Abca4O35600 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.58■□□□□ 0.73
Abca4O35600 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Abca4O35600 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.58■□□□□ 0.73
Abca4O35600 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Abca4O35600 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Abca4O35600 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.58■□□□□ 0.72
Abca4O35600 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abca4O35600 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Abca4O35600 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abca4O35600 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Abca4O35600 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abca4O35600 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abca4O35600 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Abca4O35600 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abca4O35600 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.57■□□□□ 0.72
Abca4O35600 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Abca4O35600 Gm11421-201ENSMUST00000122124 294 ntBASIC19.57■□□□□ 0.72
Abca4O35600 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Abca4O35600 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abca4O35600 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abca4O35600 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Abca4O35600 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Abca4O35600 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abca4O35600 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abca4O35600 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abca4O35600 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abca4O35600 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abca4O35600 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Abca4O35600 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Abca4O35600 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abca4O35600 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abca4O35600 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abca4O35600 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Abca4O35600 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abca4O35600 Gm9988-201ENSMUST00000069786 435 ntBASIC19.54■□□□□ 0.72
Abca4O35600 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.54■□□□□ 0.72
Abca4O35600 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.53■□□□□ 0.72
Abca4O35600 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Abca4O35600 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Abca4O35600 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abca4O35600 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abca4O35600 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Abca4O35600 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.53■□□□□ 0.72
Abca4O35600 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abca4O35600 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abca4O35600 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abca4O35600 Gm715-201ENSMUST00000117865 831 ntBASIC19.52■□□□□ 0.72
Abca4O35600 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.52■□□□□ 0.72
Abca4O35600 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abca4O35600 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abca4O35600 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.52■□□□□ 0.72
Abca4O35600 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abca4O35600 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abca4O35600 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abca4O35600 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abca4O35600 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abca4O35600 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms