Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gfra3O35118 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gfra3O35118 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.64■□□□□ 0.41
Gfra3O35118 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Gfra3O35118 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.63■□□□□ 0.41
Gfra3O35118 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.63■□□□□ 0.41
Gfra3O35118 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.63■□□□□ 0.41
Gfra3O35118 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.63■□□□□ 0.41
Gfra3O35118 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gfra3O35118 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Gfra3O35118 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gfra3O35118 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gfra3O35118 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.61■□□□□ 0.41
Gfra3O35118 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gfra3O35118 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gfra3O35118 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Gfra3O35118 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.6■□□□□ 0.41
Gfra3O35118 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gfra3O35118 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gfra3O35118 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Gfra3O35118 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gfra3O35118 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Gfra3O35118 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.6■□□□□ 0.41
Gfra3O35118 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.6■□□□□ 0.41
Gfra3O35118 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Gfra3O35118 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gfra3O35118 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gfra3O35118 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gfra3O35118 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gfra3O35118 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.59■□□□□ 0.41
Gfra3O35118 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.59■□□□□ 0.41
Gfra3O35118 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gfra3O35118 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gfra3O35118 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Gfra3O35118 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gfra3O35118 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.58■□□□□ 0.4
Gfra3O35118 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gfra3O35118 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gfra3O35118 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gfra3O35118 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gfra3O35118 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gfra3O35118 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gfra3O35118 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.57■□□□□ 0.4
Gfra3O35118 Gm12821-201ENSMUST00000120022 600 ntBASIC17.57■□□□□ 0.4
Gfra3O35118 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gfra3O35118 Gm27454-201ENSMUST00000185090 204 ntBASIC17.57■□□□□ 0.4
Gfra3O35118 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gfra3O35118 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gfra3O35118 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gfra3O35118 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gfra3O35118 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gfra3O35118 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gfra3O35118 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.57■□□□□ 0.4
Gfra3O35118 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gfra3O35118 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Gfra3O35118 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gfra3O35118 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gfra3O35118 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gfra3O35118 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Gfra3O35118 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.56■□□□□ 0.4
Gfra3O35118 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gfra3O35118 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gfra3O35118 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gfra3O35118 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gfra3O35118 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gfra3O35118 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms