Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Casp6O08738 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Casp6O08738 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Casp6O08738 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Casp6O08738 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Casp6O08738 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Casp6O08738 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Casp6O08738 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Casp6O08738 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Casp6O08738 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.59■□□□□ 0.41
Casp6O08738 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Casp6O08738 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Casp6O08738 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Casp6O08738 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Casp6O08738 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Casp6O08738 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Casp6O08738 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Casp6O08738 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Casp6O08738 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Casp6O08738 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Casp6O08738 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Casp6O08738 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Casp6O08738 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Casp6O08738 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casp6O08738 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Casp6O08738 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.57■□□□□ 0.4
Casp6O08738 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casp6O08738 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Casp6O08738 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Casp6O08738 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Casp6O08738 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Casp6O08738 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.57■□□□□ 0.4
Casp6O08738 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casp6O08738 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Casp6O08738 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casp6O08738 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Casp6O08738 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casp6O08738 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Casp6O08738 Gm26833-201ENSMUST00000180899 440 ntBASIC17.56■□□□□ 0.4
Casp6O08738 Gm43530-201ENSMUST00000195920 274 ntBASIC17.56■□□□□ 0.4
Casp6O08738 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casp6O08738 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casp6O08738 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Casp6O08738 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.55■□□□□ 0.4
Casp6O08738 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.55■□□□□ 0.4
Casp6O08738 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Casp6O08738 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casp6O08738 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casp6O08738 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casp6O08738 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Casp6O08738 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Casp6O08738 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casp6O08738 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casp6O08738 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casp6O08738 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casp6O08738 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casp6O08738 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casp6O08738 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.54■□□□□ 0.4
Casp6O08738 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casp6O08738 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Casp6O08738 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Casp6O08738 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Casp6O08738 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
Casp6O08738 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.53■□□□□ 0.4
Casp6O08738 Gm43173-201ENSMUST00000202246 593 ntBASIC17.53■□□□□ 0.4
Casp6O08738 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Casp6O08738 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Casp6O08738 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Casp6O08738 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Casp6O08738 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Casp6O08738 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Casp6O08738 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Casp6O08738 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Casp6O08738 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Casp6O08738 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Casp6O08738 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Casp6O08738 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.51■□□□□ 0.39
Casp6O08738 Gm43060-201ENSMUST00000200621 289 ntBASIC17.51■□□□□ 0.39
Casp6O08738 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Casp6O08738 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Casp6O08738 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Casp6O08738 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Casp6O08738 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Casp6O08738 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Casp6O08738 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Casp6O08738 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
Casp6O08738 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Casp6O08738 Spcs1-204ENSMUST00000226782 949 ntBASIC17.5■□□□□ 0.39
Casp6O08738 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms