Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3139J3QK78 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Gm12821-201ENSMUST00000120022 600 ntBASIC20.43■□□□□ 0.86
Gm3139J3QK78 Gm43530-201ENSMUST00000195920 274 ntBASIC20.43■□□□□ 0.86
Gm3139J3QK78 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3139J3QK78 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3139J3QK78 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3139J3QK78 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.41■□□□□ 0.86
Gm3139J3QK78 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3139J3QK78 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3139J3QK78 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3139J3QK78 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3139J3QK78 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.4■□□□□ 0.86
Gm3139J3QK78 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3139J3QK78 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.4■□□□□ 0.86
Gm3139J3QK78 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.4■□□□□ 0.86
Gm3139J3QK78 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3139J3QK78 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3139J3QK78 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3139J3QK78 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3139J3QK78 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Gm3139J3QK78 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3139J3QK78 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3139J3QK78 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3139J3QK78 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.38■□□□□ 0.85
Gm3139J3QK78 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3139J3QK78 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3139J3QK78 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3139J3QK78 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.37■□□□□ 0.85
Gm3139J3QK78 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3139J3QK78 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3139J3QK78 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3139J3QK78 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.37■□□□□ 0.85
Gm3139J3QK78 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3139J3QK78 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
Gm3139J3QK78 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3139J3QK78 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3139J3QK78 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3139J3QK78 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3139J3QK78 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3139J3QK78 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3139J3QK78 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3139J3QK78 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3139J3QK78 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3139J3QK78 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3139J3QK78 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3139J3QK78 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3139J3QK78 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3139J3QK78 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.34■□□□□ 0.85
Gm3139J3QK78 Gm27454-201ENSMUST00000185090 204 ntBASIC20.34■□□□□ 0.85
Gm3139J3QK78 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gm3139J3QK78 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3139J3QK78 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm3139J3QK78 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3139J3QK78 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms