Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28043E0CXC2 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.34■□□□□ 0.85
Gm28043E0CXC2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28043E0CXC2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28043E0CXC2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28043E0CXC2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gm28043E0CXC2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28043E0CXC2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28043E0CXC2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.33■□□□□ 0.85
Gm28043E0CXC2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28043E0CXC2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
Gm28043E0CXC2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.33■□□□□ 0.85
Gm28043E0CXC2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm28043E0CXC2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28043E0CXC2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28043E0CXC2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Gm28043E0CXC2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28043E0CXC2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Gm28043E0CXC2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28043E0CXC2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28043E0CXC2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28043E0CXC2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.3■□□□□ 0.84
Gm28043E0CXC2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28043E0CXC2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28043E0CXC2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28043E0CXC2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.29■□□□□ 0.84
Gm28043E0CXC2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28043E0CXC2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28043E0CXC2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm28043E0CXC2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28043E0CXC2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28043E0CXC2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28043E0CXC2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28043E0CXC2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gm28043E0CXC2 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.28■□□□□ 0.84
Gm28043E0CXC2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm28043E0CXC2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28043E0CXC2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gm28043E0CXC2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm28043E0CXC2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28043E0CXC2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28043E0CXC2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm28043E0CXC2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm28043E0CXC2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms