Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp27D3YV89 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp27D3YV89 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.11■□□□□ 0.33
Mmp27D3YV89 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.11■□□□□ 0.33
Mmp27D3YV89 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.11■□□□□ 0.33
Mmp27D3YV89 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp27D3YV89 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp27D3YV89 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp27D3YV89 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp27D3YV89 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.1■□□□□ 0.33
Mmp27D3YV89 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp27D3YV89 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp27D3YV89 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp27D3YV89 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.08■□□□□ 0.33
Mmp27D3YV89 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp27D3YV89 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp27D3YV89 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp27D3YV89 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp27D3YV89 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.08■□□□□ 0.32
Mmp27D3YV89 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Mmp27D3YV89 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp27D3YV89 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp27D3YV89 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp27D3YV89 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.06■□□□□ 0.32
Mmp27D3YV89 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.06■□□□□ 0.32
Mmp27D3YV89 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.06■□□□□ 0.32
Mmp27D3YV89 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.06■□□□□ 0.32
Mmp27D3YV89 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp27D3YV89 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.05■□□□□ 0.32
Mmp27D3YV89 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp27D3YV89 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp27D3YV89 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp27D3YV89 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp27D3YV89 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.03■□□□□ 0.32
Mmp27D3YV89 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp27D3YV89 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp27D3YV89 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp27D3YV89 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Mmp27D3YV89 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp27D3YV89 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms