Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Gm3880A0A1B0GSB3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Gm3880A0A1B0GSB3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Gm3880A0A1B0GSB3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Gm3880A0A1B0GSB3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC10.21□□□□□ -0.77
Gm3880A0A1B0GSB3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm3880A0A1B0GSB3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Gm3880A0A1B0GSB3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm3880A0A1B0GSB3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Gm3880A0A1B0GSB3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Gm3880A0A1B0GSB3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 Particl-201ENSMUST00000205370 1560 ntBASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC10.21□□□□□ -0.78
Gm3880A0A1B0GSB3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Gm3880A0A1B0GSB3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Gm3880A0A1B0GSB3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm3880A0A1B0GSB3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm3880A0A1B0GSB3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms