Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lcmt1A0A0U1RNF2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Lcmt1A0A0U1RNF2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lcmt1A0A0U1RNF2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Lcmt1A0A0U1RNF2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lcmt1A0A0U1RNF2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Lcmt1A0A0U1RNF2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Lcmt1A0A0U1RNF2 Gm15820-201ENSMUST00000201566 728 ntBASIC22.64■■□□□ 1.21
Lcmt1A0A0U1RNF2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lcmt1A0A0U1RNF2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lcmt1A0A0U1RNF2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lcmt1A0A0U1RNF2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lcmt1A0A0U1RNF2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lcmt1A0A0U1RNF2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lcmt1A0A0U1RNF2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lcmt1A0A0U1RNF2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lcmt1A0A0U1RNF2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lcmt1A0A0U1RNF2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Lcmt1A0A0U1RNF2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Lcmt1A0A0U1RNF2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Lcmt1A0A0U1RNF2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lcmt1A0A0U1RNF2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lcmt1A0A0U1RNF2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lcmt1A0A0U1RNF2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.62■■□□□ 1.21
Lcmt1A0A0U1RNF2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Lcmt1A0A0U1RNF2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.62■■□□□ 1.21
Lcmt1A0A0U1RNF2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Lcmt1A0A0U1RNF2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lcmt1A0A0U1RNF2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Lcmt1A0A0U1RNF2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lcmt1A0A0U1RNF2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Lcmt1A0A0U1RNF2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lcmt1A0A0U1RNF2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lcmt1A0A0U1RNF2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lcmt1A0A0U1RNF2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Lcmt1A0A0U1RNF2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Lcmt1A0A0U1RNF2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.58■■□□□ 1.21
Lcmt1A0A0U1RNF2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Lcmt1A0A0U1RNF2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Lcmt1A0A0U1RNF2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Lcmt1A0A0U1RNF2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Lcmt1A0A0U1RNF2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Lcmt1A0A0U1RNF2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.57■■□□□ 1.2
Lcmt1A0A0U1RNF2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Lcmt1A0A0U1RNF2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.55■■□□□ 1.2
Lcmt1A0A0U1RNF2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lcmt1A0A0U1RNF2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lcmt1A0A0U1RNF2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lcmt1A0A0U1RNF2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.55■■□□□ 1.2
Lcmt1A0A0U1RNF2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.55■■□□□ 1.2
Lcmt1A0A0U1RNF2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Lcmt1A0A0U1RNF2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lcmt1A0A0U1RNF2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lcmt1A0A0U1RNF2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms