Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav23A0A0G2JG17 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav23A0A0G2JG17 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Trav23A0A0G2JG17 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav23A0A0G2JG17 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav23A0A0G2JG17 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav23A0A0G2JG17 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.61■□□□□ 0.25
Trav23A0A0G2JG17 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav23A0A0G2JG17 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav23A0A0G2JG17 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav23A0A0G2JG17 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav23A0A0G2JG17 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav23A0A0G2JG17 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Gm22238-201ENSMUST00000175222 88 ntBASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav23A0A0G2JG17 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav23A0A0G2JG17 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav23A0A0G2JG17 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav23A0A0G2JG17 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav23A0A0G2JG17 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
Trav23A0A0G2JG17 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav23A0A0G2JG17 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav23A0A0G2JG17 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav23A0A0G2JG17 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms