Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-4A0A0G2JFX3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms