Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-27A0A0G2JF28 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-27A0A0G2JF28 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-27A0A0G2JF28 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-27A0A0G2JF28 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-27A0A0G2JF28 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Igkv8-27A0A0G2JF28 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Igkv8-27A0A0G2JF28 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-27A0A0G2JF28 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-27A0A0G2JF28 Gm13889-201ENSMUST00000099689 1386 ntBASIC12.79□□□□□ -0.36
Igkv8-27A0A0G2JF28 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igkv8-27A0A0G2JF28 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Nkain2-201ENSMUST00000092602 558 ntBASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-27A0A0G2JF28 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Igkv8-27A0A0G2JF28 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igkv8-27A0A0G2JF28 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igkv8-27A0A0G2JF28 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Igkv8-27A0A0G2JF28 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Igkv8-27A0A0G2JF28 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Gm37035-201ENSMUST00000194809 2148 ntBASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv8-27A0A0G2JF28 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Gm9812-201ENSMUST00000061934 968 ntBASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv8-27A0A0G2JF28 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 AC122317.2-201ENSMUST00000218708 1248 ntBASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv8-27A0A0G2JF28 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms