Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.71□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Notumos-201ENSMUST00000151998 2659 ntBASIC14.67□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Gm12922-201ENSMUST00000120626 809 ntBASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms