Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28897A0A087WP44 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm28897A0A087WP44 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm28897A0A087WP44 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm28897A0A087WP44 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm28897A0A087WP44 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28897A0A087WP44 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18■□□□□ 0.47
Gm28897A0A087WP44 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28897A0A087WP44 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Gm6311-201ENSMUST00000073790 878 ntBASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.99■□□□□ 0.47
Gm28897A0A087WP44 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28897A0A087WP44 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28897A0A087WP44 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28897A0A087WP44 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Gm28897A0A087WP44 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28897A0A087WP44 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28897A0A087WP44 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Gm28897A0A087WP44 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28897A0A087WP44 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Gm28897A0A087WP44 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28897A0A087WP44 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms