Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gm13238-201ENSMUST00000117655 780 ntBASIC15.66■□□□□ 0.1
Trav21-dv12A0A075B6C4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav21-dv12A0A075B6C4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav21-dv12A0A075B6C4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav21-dv12A0A075B6C4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav21-dv12A0A075B6C4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav21-dv12A0A075B6C4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Trav21-dv12A0A075B6C4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Trav21-dv12A0A075B6C4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.64■□□□□ 0.1
Trav21-dv12A0A075B6C4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trav21-dv12A0A075B6C4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav21-dv12A0A075B6C4 Gm43566-201ENSMUST00000196851 808 ntBASIC15.64■□□□□ 0.09
Trav21-dv12A0A075B6C4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav21-dv12A0A075B6C4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav21-dv12A0A075B6C4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav21-dv12A0A075B6C4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav21-dv12A0A075B6C4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav21-dv12A0A075B6C4 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.63■□□□□ 0.09
Trav21-dv12A0A075B6C4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav21-dv12A0A075B6C4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav21-dv12A0A075B6C4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav21-dv12A0A075B6C4 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav21-dv12A0A075B6C4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav21-dv12A0A075B6C4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav21-dv12A0A075B6C4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav21-dv12A0A075B6C4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav21-dv12A0A075B6C4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav21-dv12A0A075B6C4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav21-dv12A0A075B6C4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav21-dv12A0A075B6C4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms