Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-4A0A075B6B4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav6-4A0A075B6B4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav6-4A0A075B6B4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-4A0A075B6B4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav6-4A0A075B6B4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav6-4A0A075B6B4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-4A0A075B6B4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-4A0A075B6B4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-4A0A075B6B4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-4A0A075B6B4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav6-4A0A075B6B4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-4A0A075B6B4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-4A0A075B6B4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-4A0A075B6B4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6-4A0A075B6B4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6-4A0A075B6B4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6-4A0A075B6B4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-4A0A075B6B4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-4A0A075B6B4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav6-4A0A075B6B4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-4A0A075B6B4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.69■□□□□ 0.1
Trav6-4A0A075B6B4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-4A0A075B6B4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-4A0A075B6B4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-4A0A075B6B4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-4A0A075B6B4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-4A0A075B6B4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-4A0A075B6B4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav6-4A0A075B6B4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-4A0A075B6B4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav6-4A0A075B6B4 Gm22238-201ENSMUST00000175222 88 ntBASIC15.67■□□□□ 0.1
Trav6-4A0A075B6B4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-4A0A075B6B4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav6-4A0A075B6B4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-4A0A075B6B4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 Gm7143-201ENSMUST00000222811 859 ntBASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-4A0A075B6B4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-4A0A075B6B4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-4A0A075B6B4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav6-4A0A075B6B4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms