Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12d-3A0A075B6A4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-3A0A075B6A4 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.27■□□□□ 0.04
Trav12d-3A0A075B6A4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav12d-3A0A075B6A4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.27■□□□□ 0.04
Trav12d-3A0A075B6A4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-3A0A075B6A4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12d-3A0A075B6A4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav12d-3A0A075B6A4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12d-3A0A075B6A4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav12d-3A0A075B6A4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12d-3A0A075B6A4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12d-3A0A075B6A4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav12d-3A0A075B6A4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12d-3A0A075B6A4 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.27■□□□□ 0.03
Trav12d-3A0A075B6A4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12d-3A0A075B6A4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-3A0A075B6A4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-3A0A075B6A4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-3A0A075B6A4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav12d-3A0A075B6A4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-3A0A075B6A4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trav12d-3A0A075B6A4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12d-3A0A075B6A4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-3A0A075B6A4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-3A0A075B6A4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-3A0A075B6A4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-3A0A075B6A4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-3A0A075B6A4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-3A0A075B6A4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-3A0A075B6A4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-3A0A075B6A4 Nkain2-201ENSMUST00000092602 558 ntBASIC15.23■□□□□ 0.03
Trav12d-3A0A075B6A4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-3A0A075B6A4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Terc-201ENSMUST00000082862 423 ntBASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-3A0A075B6A4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-3A0A075B6A4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12d-3A0A075B6A4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav12d-3A0A075B6A4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-3A0A075B6A4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms