Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav16A0A075B653 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav16A0A075B653 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav16A0A075B653 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav16A0A075B653 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16A0A075B653 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav16A0A075B653 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16A0A075B653 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16A0A075B653 Gm9806-201ENSMUST00000051080 552 ntBASIC15.68■□□□□ 0.1
Trav16A0A075B653 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16A0A075B653 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav16A0A075B653 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav16A0A075B653 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav16A0A075B653 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Scarna2-201ENSMUST00000157560 414 ntBASIC15.67■□□□□ 0.1
Trav16A0A075B653 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.67■□□□□ 0.1
Trav16A0A075B653 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav16A0A075B653 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16A0A075B653 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16A0A075B653 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16A0A075B653 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav16A0A075B653 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16A0A075B653 Gm16437-201ENSMUST00000025669 507 ntBASIC15.66■□□□□ 0.1
Trav16A0A075B653 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16A0A075B653 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav16A0A075B653 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav16A0A075B653 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav16A0A075B653 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trav16A0A075B653 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.64■□□□□ 0.09
Trav16A0A075B653 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav16A0A075B653 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.64■□□□□ 0.09
Trav16A0A075B653 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16A0A075B653 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.64■□□□□ 0.09
Trav16A0A075B653 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav16A0A075B653 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms