Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav5-4A0A075B652 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 Gm43566-201ENSMUST00000196851 808 ntBASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav5-4A0A075B652 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav5-4A0A075B652 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trav5-4A0A075B652 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.96■□□□□ 0.3
Trav5-4A0A075B652 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav5-4A0A075B652 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav5-4A0A075B652 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5-4A0A075B652 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-4A0A075B652 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-4A0A075B652 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-4A0A075B652 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-4A0A075B652 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-4A0A075B652 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Trav5-4A0A075B652 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav5-4A0A075B652 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5-4A0A075B652 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5-4A0A075B652 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5-4A0A075B652 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-4A0A075B652 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-4A0A075B652 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-4A0A075B652 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-4A0A075B652 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-4A0A075B652 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav5-4A0A075B652 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-4A0A075B652 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.9■□□□□ 0.3
Trav5-4A0A075B652 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav5-4A0A075B652 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-4A0A075B652 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-4A0A075B652 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-4A0A075B652 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-4A0A075B652 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav5-4A0A075B652 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav5-4A0A075B652 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-4A0A075B652 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms