Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-2A0A075B649 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-2A0A075B649 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-2A0A075B649 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-2A0A075B649 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13-2A0A075B649 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Iqck-206ENSMUST00000208658 2891 ntBASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-2A0A075B649 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13-2A0A075B649 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms