Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6-6A0A075B603 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Gm14523-201ENSMUST00000117260 558 ntBASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-6A0A075B603 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-6A0A075B603 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-6A0A075B603 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-6A0A075B603 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-6A0A075B603 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-6A0A075B603 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-6A0A075B603 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav6-6A0A075B603 Gm7332-201ENSMUST00000118351 454 ntBASIC15.08■□□□□ 0
Trav6-6A0A075B603 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.08■□□□□ 0
Trav6-6A0A075B603 Gm27502-201ENSMUST00000183495 199 ntBASIC15.08■□□□□ 0
Trav6-6A0A075B603 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.08■□□□□ 0
Trav6-6A0A075B603 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.08■□□□□ 0
Trav6-6A0A075B603 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav6-6A0A075B603 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-6A0A075B603 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-6A0A075B603 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-6A0A075B603 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms