Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Gm10268-201ENSMUST00000085340 555 ntBASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ube4bQ9ES00 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Gm4984-201ENSMUST00000115987 360 ntBASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Gm16177-201ENSMUST00000120728 718 ntBASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.1□□□□□ -0.63
Ube4bQ9ES00 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube4bQ9ES00 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm13492-201ENSMUST00000119772 665 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm9083-201ENSMUST00000120423 819 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm11424-201ENSMUST00000121929 829 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm23119-201ENSMUST00000158610 140 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm5745-201ENSMUST00000183748 313 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm27682-201ENSMUST00000183930 110 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube4bQ9ES00 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms