Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn3Q9DCB1 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn3Q9DCB1 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm4984-201ENSMUST00000115987 360 ntBASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gm13570-201ENSMUST00000140763 309 ntBASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.84□□□□□ -0.67
Hmgn3Q9DCB1 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms