Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trem2Q99NH8 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trem2Q99NH8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trem2Q99NH8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trem2Q99NH8 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trem2Q99NH8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trem2Q99NH8 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trem2Q99NH8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Trem2Q99NH8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trem2Q99NH8 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trem2Q99NH8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Rgr-203ENSMUST00000225070 4704 ntBASIC11.77□□□□□ -0.53
Trem2Q99NH8 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Gm24891-201ENSMUST00000104391 136 ntBASIC11.77□□□□□ -0.53
Trem2Q99NH8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Trem2Q99NH8 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Gm9540-201ENSMUST00000188230 478 ntBASIC11.77□□□□□ -0.53
Trem2Q99NH8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.77□□□□□ -0.53
Trem2Q99NH8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Erich3-203ENSMUST00000189969 3460 ntBASIC11.77□□□□□ -0.53
Trem2Q99NH8 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.77□□□□□ -0.53
Trem2Q99NH8 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trem2Q99NH8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.76□□□□□ -0.53
Trem2Q99NH8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Gm4857-201ENSMUST00000192718 785 ntBASIC11.76□□□□□ -0.53
Trem2Q99NH8 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.76□□□□□ -0.53
Trem2Q99NH8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trem2Q99NH8 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.75□□□□□ -0.53
Trem2Q99NH8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trem2Q99NH8 BC043934-202ENSMUST00000185694 2356 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms