Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Usp44Q8C2S0 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.52□□□□□ -0.24
Usp44Q8C2S0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Mir6979-201ENSMUST00000183927 56 ntBASIC13.52□□□□□ -0.25
Usp44Q8C2S0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Usp44Q8C2S0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm16166-201ENSMUST00000118291 787 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm4726-201ENSMUST00000135604 736 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm6019-201ENSMUST00000148369 736 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Olfml3-204ENSMUST00000169286 874 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm4654-201ENSMUST00000183305 982 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm45856-201ENSMUST00000212752 416 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Usp44Q8C2S0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm10051-201ENSMUST00000145209 414 ntBASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm17831-201ENSMUST00000205579 900 ntBASIC13.5□□□□□ -0.25
Usp44Q8C2S0 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.5□□□□□ -0.25
Usp44Q8C2S0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Usp44Q8C2S0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms