Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm13736-201ENSMUST00000119272 253 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm11700-201ENSMUST00000119409 403 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm11814-201ENSMUST00000119515 929 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm15610-201ENSMUST00000120584 195 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm37201-201ENSMUST00000191845 523 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm42693-201ENSMUST00000196779 631 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm9908-201ENSMUST00000211534 448 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm10012-201ENSMUST00000078252 192 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smco3Q8BQM7 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm27847-201ENSMUST00000183711 107 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm27375-201ENSMUST00000183799 107 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm27839-201ENSMUST00000184242 106 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm27892-201ENSMUST00000185017 106 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm6745-201ENSMUST00000199216 526 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm43002-201ENSMUST00000200310 155 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco3Q8BQM7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco3Q8BQM7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms