Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trim63Q38HM4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Gm11025-201ENSMUST00000140773 466 ntBASIC9.47□□□□□ -0.89
Trim63Q38HM4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Gm37597-201ENSMUST00000191853 382 ntBASIC9.47□□□□□ -0.89
Trim63Q38HM4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 AC138767.1-201ENSMUST00000222661 415 ntBASIC9.47□□□□□ -0.89
Trim63Q38HM4 Gm9229-201ENSMUST00000222777 126 ntBASIC9.47□□□□□ -0.89
Trim63Q38HM4 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.47□□□□□ -0.89
Trim63Q38HM4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trim63Q38HM4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim63Q38HM4 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.46□□□□□ -0.89
Trim63Q38HM4 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trim63Q38HM4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Gm12350-201ENSMUST00000121208 462 ntBASIC9.46□□□□□ -0.9
Trim63Q38HM4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Gm25116-201ENSMUST00000157191 122 ntBASIC9.46□□□□□ -0.9
Trim63Q38HM4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.46□□□□□ -0.9
Trim63Q38HM4 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.46□□□□□ -0.9
Trim63Q38HM4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.46□□□□□ -0.9
Trim63Q38HM4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.46□□□□□ -0.9
Trim63Q38HM4 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.46□□□□□ -0.9
Trim63Q38HM4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms