Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC10.33□□□□□ -0.75
Chd8Q09XV5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Gm8661-201ENSMUST00000118688 992 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Gm13758-201ENSMUST00000118699 743 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 AC160109.1-201ENSMUST00000225592 729 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Gm18733-202ENSMUST00000174447 401 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Gm43664-201ENSMUST00000196038 734 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 CR974487.1-201ENSMUST00000220984 413 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Chd8Q09XV5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm13215-201ENSMUST00000117559 472 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm12745-201ENSMUST00000121767 214 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm13217-201ENSMUST00000120466 953 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm23563-201ENSMUST00000174900 251 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm18014-201ENSMUST00000183369 817 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms