Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.34□□□□□ -0.91
Sssca1P56873 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sssca1P56873 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Sssca1P56873 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Sssca1P56873 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.33□□□□□ -0.92
Sssca1P56873 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Gm11511-201ENSMUST00000118146 540 ntBASIC9.33□□□□□ -0.92
Sssca1P56873 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.33□□□□□ -0.92
Sssca1P56873 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.33□□□□□ -0.92
Sssca1P56873 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.33□□□□□ -0.92
Sssca1P56873 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.33□□□□□ -0.92
Sssca1P56873 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Sssca1P56873 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Sssca1P56873 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sssca1P56873 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Sssca1P56873 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.32□□□□□ -0.92
Sssca1P56873 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.32□□□□□ -0.92
Sssca1P56873 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.32□□□□□ -0.92
Sssca1P56873 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.32□□□□□ -0.92
Sssca1P56873 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.32□□□□□ -0.92
Sssca1P56873 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.32□□□□□ -0.92
Sssca1P56873 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 Gm4607-201ENSMUST00000206649 577 ntBASIC9.32□□□□□ -0.92
Sssca1P56873 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.32□□□□□ -0.92
Sssca1P56873 Gm8712-201ENSMUST00000221090 701 ntBASIC9.32□□□□□ -0.92
Sssca1P56873 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Sssca1P56873 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms