Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.68□□□□□ -0.22
Col3a1P08121 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Col3a1P08121 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.68□□□□□ -0.22
Col3a1P08121 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col3a1P08121 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Snord17-201ENSMUST00000104526 238 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm14497-201ENSMUST00000119537 580 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Gm12783-201ENSMUST00000121425 397 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Gm4917-201ENSMUST00000121452 650 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.67□□□□□ -0.22
Col3a1P08121 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm43778-201ENSMUST00000199438 199 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm2594-201ENSMUST00000214774 742 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Col3a1P08121 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.67□□□□□ -0.22
Col3a1P08121 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Mir6923-201ENSMUST00000184592 72 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.67□□□□□ -0.22
Col3a1P08121 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Col3a1P08121 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Gm8181-201ENSMUST00000062242 669 ntBASIC13.67□□□□□ -0.22
Col3a1P08121 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col3a1P08121 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.66□□□□□ -0.22
Col3a1P08121 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col3a1P08121 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col3a1P08121 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.66□□□□□ -0.22
Col3a1P08121 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col3a1P08121 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col3a1P08121 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.66□□□□□ -0.22
Col3a1P08121 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.66□□□□□ -0.22
Col3a1P08121 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.66□□□□□ -0.22
Col3a1P08121 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.66□□□□□ -0.22
Col3a1P08121 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col3a1P08121 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col3a1P08121 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms