Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Shisa8J3QNX5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Gm10434-201ENSMUST00000101158 471 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shisa8J3QNX5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shisa8J3QNX5 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shisa8J3QNX5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms