Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm13296-201ENSMUST00000117854 997 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm28937-201ENSMUST00000185413 695 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm29400-201ENSMUST00000187208 695 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm28662-201ENSMUST00000188446 695 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm28251-201ENSMUST00000188835 695 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm37318-201ENSMUST00000194325 695 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm38017-201ENSMUST00000194768 695 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm7003-201ENSMUST00000195089 312 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm37287-201ENSMUST00000195449 695 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm37793-201ENSMUST00000195548 695 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm5705-201ENSMUST00000066241 711 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ercc4Q9QZD4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ercc4Q9QZD4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ercc4Q9QZD4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms