Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Gm12579-201ENSMUST00000118040 783 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Gm8459-201ENSMUST00000162504 760 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Mir7677-201ENSMUST00000184226 67 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Gm38151-201ENSMUST00000195085 289 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Cpne8Q9DC53 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm5714-201ENSMUST00000197343 566 ntBASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cpne8Q9DC53 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms