Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Stag1Q9D3E6 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Stag1Q9D3E6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Stag1Q9D3E6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Stag1Q9D3E6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Mir6407-201ENSMUST00000184510 101 ntBASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm38314-201ENSMUST00000195709 625 ntBASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Stag1Q9D3E6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm14892-201ENSMUST00000117636 267 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm15329-201ENSMUST00000121408 155 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm15549-201ENSMUST00000121595 622 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gm9139-201ENSMUST00000218817 700 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.82□□□□□ -0.2
Stag1Q9D3E6 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Stag1Q9D3E6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm14395-201ENSMUST00000120494 563 ntBASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm20495-201ENSMUST00000173902 235 ntBASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.81□□□□□ -0.2
Stag1Q9D3E6 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm3619-201ENSMUST00000219947 775 ntBASIC13.81□□□□□ -0.2
Stag1Q9D3E6 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Stag1Q9D3E6 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms