Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm9372-201ENSMUST00000168454 430 ntBASIC14.3□□□□□ -0.12
RtcbQ99LF4 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Mir7035-201ENSMUST00000184713 82 ntBASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm37782-201ENSMUST00000194879 678 ntBASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm43249-201ENSMUST00000200464 458 ntBASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Gm9791-201ENSMUST00000060997 447 ntBASIC14.3□□□□□ -0.12
RtcbQ99LF4 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RtcbQ99LF4 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.3□□□□□ -0.12
RtcbQ99LF4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC14.29□□□□□ -0.12
RtcbQ99LF4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Gm43547-201ENSMUST00000197729 328 ntBASIC14.29□□□□□ -0.12
RtcbQ99LF4 Gm30946-201ENSMUST00000198288 724 ntBASIC14.29□□□□□ -0.12
RtcbQ99LF4 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Gm4903-201ENSMUST00000210462 405 ntBASIC14.29□□□□□ -0.12
RtcbQ99LF4 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RtcbQ99LF4 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RtcbQ99LF4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm6630-201ENSMUST00000119199 454 ntBASIC14.28□□□□□ -0.12
RtcbQ99LF4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm13284-201ENSMUST00000121020 547 ntBASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm44814-201ENSMUST00000207018 434 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms