Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm2P58774 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tpm2P58774 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Tpm2P58774 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Tpm2P58774 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tpm2P58774 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC13.33□□□□□ -0.27
Tpm2P58774 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tpm2P58774 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tpm2P58774 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tpm2P58774 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.33□□□□□ -0.28
Tpm2P58774 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.33□□□□□ -0.28
Tpm2P58774 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Snora73a-201ENSMUST00000082453 205 ntBASIC13.33□□□□□ -0.28
Tpm2P58774 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.33□□□□□ -0.28
Tpm2P58774 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tpm2P58774 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.33□□□□□ -0.28
Tpm2P58774 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tpm2P58774 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Tpm2P58774 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tpm2P58774 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tpm2P58774 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.32□□□□□ -0.28
Tpm2P58774 Gm17150-201ENSMUST00000165577 381 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tpm2P58774 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 Gm8602-201ENSMUST00000184045 607 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Gm27731-201ENSMUST00000185192 107 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Gm18711-201ENSMUST00000199341 750 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tpm2P58774 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tpm2P58774 AC160340.2-201ENSMUST00000220812 3675 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.32□□□□□ -0.28
Tpm2P58774 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tpm2P58774 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tpm2P58774 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.32□□□□□ -0.28
Tpm2P58774 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms