Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AA914427-201ENSMUST00000193194 1166 ntBASIC12.19□□□□□ -0.46
Usp4P35123 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.19□□□□□ -0.46
Usp4P35123 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.19□□□□□ -0.46
Usp4P35123 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp4P35123 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp4P35123 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Usp4P35123 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp4P35123 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp4P35123 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp4P35123 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.19□□□□□ -0.46
Usp4P35123 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.19□□□□□ -0.46
Usp4P35123 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.18□□□□□ -0.46
Usp4P35123 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.18□□□□□ -0.46
Usp4P35123 Gm4909-201ENSMUST00000118749 794 ntBASIC12.18□□□□□ -0.46
Usp4P35123 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.18□□□□□ -0.46
Usp4P35123 Gm18893-201ENSMUST00000198416 943 ntBASIC12.18□□□□□ -0.46
Usp4P35123 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.18□□□□□ -0.46
Usp4P35123 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Usp4P35123 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Usp4P35123 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.17□□□□□ -0.46
Usp4P35123 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usp4P35123 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.17□□□□□ -0.46
Usp4P35123 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usp4P35123 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usp4P35123 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Gm22902-201ENSMUST00000158488 302 ntBASIC12.17□□□□□ -0.46
Usp4P35123 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.17□□□□□ -0.46
Usp4P35123 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp4P35123 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.17□□□□□ -0.46
Usp4P35123 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Usp4P35123 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Gm9996-201ENSMUST00000070359 913 ntBASIC12.17□□□□□ -0.46
Usp4P35123 Rgr-203ENSMUST00000225070 4704 ntBASIC12.17□□□□□ -0.46
Usp4P35123 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms