Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.52□□□□□ -0.57
Pdlim1O70400 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdlim1O70400 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm22920-201ENSMUST00000102175 109 ntBASIC11.51□□□□□ -0.57
Pdlim1O70400 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm22711-201ENSMUST00000116890 133 ntBASIC11.51□□□□□ -0.57
Pdlim1O70400 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm7666-201ENSMUST00000146631 819 ntBASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm12407-201ENSMUST00000180219 324 ntBASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.51□□□□□ -0.57
Pdlim1O70400 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.51□□□□□ -0.57
Pdlim1O70400 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.51□□□□□ -0.57
Pdlim1O70400 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.51□□□□□ -0.57
Pdlim1O70400 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdlim1O70400 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdlim1O70400 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdlim1O70400 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Gm24844-201ENSMUST00000158679 127 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Gm19353-201ENSMUST00000184561 445 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 Gm43966-201ENSMUST00000203301 612 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.5□□□□□ -0.57
Pdlim1O70400 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms