Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh1F7BJK1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm29396-201ENSMUST00000185659 716 ntBASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm8956-201ENSMUST00000203939 825 ntBASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm18054-201ENSMUST00000207539 555 ntBASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm18065-201ENSMUST00000221395 526 ntBASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh1F7BJK1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh1F7BJK1 Gm43966-201ENSMUST00000203301 612 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms