Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm37819-201ENSMUST00000194626 1065 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm9273-201ENSMUST00000200606 715 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm7589-201ENSMUST00000085631 534 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lysmd1Q9D0E3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 n-R5s154-201ENSMUST00000122513 108 ntBASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm13898-201ENSMUST00000141865 610 ntBASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm26931-201ENSMUST00000182273 609 ntBASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm5845-201ENSMUST00000195812 796 ntBASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm9771-201ENSMUST00000198267 1137 ntBASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Zkscan7-205ENSMUST00000216462 990 ntBASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Gm26035-201ENSMUST00000083065 308 ntBASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lysmd1Q9D0E3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Gm3828-201ENSMUST00000121817 257 ntBASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lysmd1Q9D0E3 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms