Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Gm15207-201ENSMUST00000119259 442 ntBASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Gm26047-201ENSMUST00000157308 113 ntBASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Gm26047-202ENSMUST00000198840 115 ntBASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim11Q99PQ2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Gm24749-201ENSMUST00000157838 343 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Gm28686-201ENSMUST00000187404 609 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Gm807-202ENSMUST00000224929 408 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.24□□□□□ -0.29
Trim11Q99PQ2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim11Q99PQ2 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Gm23949-201ENSMUST00000104027 127 ntBASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim11Q99PQ2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms