Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Gm25076-201ENSMUST00000104098 132 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 Gm16166-201ENSMUST00000118291 787 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Gm42518-201ENSMUST00000196277 938 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.51□□□□□ -0.41
TraipQ8VIG6 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TraipQ8VIG6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.5□□□□□ -0.41
TraipQ8VIG6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.5□□□□□ -0.41
TraipQ8VIG6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Gm16219-201ENSMUST00000120096 274 ntBASIC12.5□□□□□ -0.41
TraipQ8VIG6 Gm1848-201ENSMUST00000120711 789 ntBASIC12.5□□□□□ -0.41
TraipQ8VIG6 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.5□□□□□ -0.41
TraipQ8VIG6 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.5□□□□□ -0.41
TraipQ8VIG6 Gm2875-201ENSMUST00000211333 360 ntBASIC12.5□□□□□ -0.41
TraipQ8VIG6 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Gm4454-201ENSMUST00000190585 2578 ntBASIC12.5□□□□□ -0.41
TraipQ8VIG6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
TraipQ8VIG6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.49□□□□□ -0.41
TraipQ8VIG6 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 AC123619.1-203ENSMUST00000225276 2757 ntBASIC12.49□□□□□ -0.41
TraipQ8VIG6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.49□□□□□ -0.41
TraipQ8VIG6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.49□□□□□ -0.41
TraipQ8VIG6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TraipQ8VIG6 Gm11700-201ENSMUST00000119409 403 ntBASIC12.49□□□□□ -0.41
TraipQ8VIG6 Gm12899-201ENSMUST00000120565 551 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms