Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Gm25343-201ENSMUST00000157460 107 ntBASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Gm24294-201ENSMUST00000158295 277 ntBASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Cd9-ps-201ENSMUST00000174687 650 ntBASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Gm26119-201ENSMUST00000175601 104 ntBASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Gm21778-201ENSMUST00000178779 471 ntBASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Mir6387-201ENSMUST00000184042 108 ntBASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ddx54Q8K4L0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Matn2-206ENSMUST00000228570 2798 ntBASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gm23132-201ENSMUST00000104254 132 ntBASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gm25872-201ENSMUST00000177784 100 ntBASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 AC154213.1-201ENSMUST00000228234 583 ntBASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx54Q8K4L0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.02
Ddx54Q8K4L0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm37014-201ENSMUST00000194723 2253 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm43167-201ENSMUST00000202001 1606 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 AC154354.1-203ENSMUST00000225565 1364 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm13192-201ENSMUST00000101199 208 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm10443-201ENSMUST00000119024 210 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm13284-201ENSMUST00000121020 547 ntBASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ddx54Q8K4L0 Mir6359-201ENSMUST00000183668 81 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms