Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm37424-201ENSMUST00000191727 561 ntBASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Olfr284-202ENSMUST00000206647 966 ntBASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm19187-201ENSMUST00000206781 892 ntBASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm30285-201ENSMUST00000214614 422 ntBASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm9823-201ENSMUST00000051212 327 ntBASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nhlrc3Q8CCH2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm11511-201ENSMUST00000118146 540 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm5070-201ENSMUST00000177599 862 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm18187-201ENSMUST00000196476 984 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm8956-201ENSMUST00000203939 825 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nhlrc3Q8CCH2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nhlrc3Q8CCH2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms